Protein ZmWRKY42
ZmWRKY42 is a protein in the WRKY family.
Information
TF Name: ZmWRKY42
Species: Maize
TF Family: WRKY
Gene Name(Synonym): WRKY42
Uniprot ID: B7ZY62

Protein ZmWRKY42

ZmWRKY42 is a protein in the WRKY family.

Overview of domains present in v5 transcripts
PF03106
Zm00001eb359740_T001
Zm00001eb359740_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d011527DAPseq no logo sequence fimo position
Zm00001d011527DAPseq no logo sequence fimo position
Zm00001d011527ChIPseq no logo sequence fimo position
Zm00001d011527PChIPseq no logo sequence fimo position

Interactions where ZmWRKY42 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmWRKY42 is the target  
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There are 264 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb359740_T001 from maize genome v5

Amino Acid Sequence
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MSSGDFHYHDELAALFAQRPAPAGEMTMALQQQAPAASWFADYLHAGAPGMGMDMDYDLLCRALDLPVPGDEDGVVKREL
LLVADTGGGGGGFAAPLTPNTTSSMSSSSSEAAGAAAGGGGGGSFGAAEEESQSLGRCKKEDDGDGEESKDKEAMKGEED
DADTGKKGSAAGKGKGKGEKRQRQPRIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCPVKKRVERSHQ
DPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGAFPPPPPPPQTMCLPFVGRTGDGGGVIDMLGLCLPPR
NHAAVPPAATGLAPSPCCMSGPVGTVAGATTTTAPTTTTVTTTTTSSPPPPPSLQTMQHFMAQDDFGLLQDMLPSSSSSL
SFVVHSNGSNVQLP

MSSGDFHYHDELAALFAQRPAPAGEMTMALQQQAPAASWFADYLHAGAPGMGMDMDYDLLCRALDLPVPGDEDGVVKREL
LLVADTGGGGGGFAAPLTPNTTSSMSSSSSEAAGAAAGGGGGGSFGAAEEESQSLGRCKKEDDGDGEESKDKEAMKGEED
DADTGKKGSAAGKGKGKGEKRQRQPRIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCPVKKRVERSHQ
DPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGAFPPPPPPPQTMCLPFVGRTGDGGGVIDMLGLCLPPR
NHAAVPPAATGLAPSPCCMSGPVGTVAGATTTTAPTTTTVTTTTTSSPPPPPSLQTMQHFMAQDDFGLLQDMLPSSSSSL
SFVVHSNGSNVQLP

MSSGDFHYHDELAALFAQRPAPAGEMTMALQQQAPAASWFADYLHAGAPGMGMDMDYDLLCRALDLPVPGDEDGVVKREL
LLVADTGGGGGGFAAPLTPNTTSSMSSSSSEAAGAAAGGGGGGSFGAAEEESQSLGRCKKEDDGDGEESKDKEAMKGEED
DADTGKKGSAAGKGKGKGEKRQRQPRIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCPVKKRVERSHQ
DPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGAFPPPPPPPQTMCLPFVGRTGDGGGVIDMLGLCLPPR
NHAAVPPAATGLAPSPCCMSGPVGTVAGATTTTAPTTTTVTTTTTSSPPPPPSLQTMQHFMAQDDFGLLQDMLPSSSSSL
SFVVHSNGSNVQLP

MSSGDFHYHDELAALFAQRPAPAGEMTMALQQQAPAASWFADYLHAGAPGMGMDMDYDLLCRALDLPVPGDEDGVVKREL
LLVADTGGGGGGFAAPLTPNTTSSMSSSSSEAAGAAAGGGGGGSFGAAEEESQSLGRCKKEDDGDGEESKDKEAMKGEED
DADTGKKGSAAGKGKGKGEKRQRQPRIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCPVKKRVERSHQ
DPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGAFPPPPPPPQTMCLPFVGRTGDGGGVIDMLGLCLPPR
NHAAVPPAATGLAPSPCCMSGPVGTVAGATTTTAPTTTTVTTTTTSSPPPPPSLQTMQHFMAQDDFGLLQDMLPSSSSSL
SFVVHSNGSNVQLP

MSSGDFHYHDELAALFAQRPAPAGEMTMALQQQAPAASWFADYLHAGAPGMGMDMDYDLLCRALDLPVPGDEDGVVKREL
LLVADTGGGGGGFAAPLTPNTTSSMSSSSSEAAGAAAGGGGGGSFGAAEEESQSLGRCKKEDDGDGEESKDKEAMKGEED
DADTGKKGSAAGKGKGKGEKRQRQPRIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCPVKKRVERSHQ
DPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGAFPPPPPPPQTMCLPFVGRTGDGGGVIDMLGLCLPPR
NHAAVPPAATGLAPSPCCMSGPVGTVAGATTTTAPTTTTVTTTTTSSPPPPPSLQTMQHFMAQDDFGLLQDMLPSSSSSL
SFVVHSNGSNVQLP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF03106
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Nucleotide Sequence
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AAAAAATTCCATCCGTCAGTATATA...

GRMZM5G812272_T01 from maize genome v3


Related TFome: pUT4260

Amino Acid Sequence
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MVMACRSYYRCTTQRCPVKKRVERSHQDPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGAFPPPPPPPQ
TMCLPFVGRTGDGGGVIDMLGLCLPPRNHAAVPPAATGLAPSPCCMSGPVGTVAGATTTTAPTTTTVTTTTTSSPPPPPS
LQTMQHFMAQDDFGLLQDMLPSSSSSLSFVVHSNGSNVQLP

Nucleotide Sequence
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CCAGAGTACGTCTCAAGATTAGGGG...

GRMZM5G812272_T02 from maize genome v3

Amino Acid Sequence
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MSSGDFHYHDELAALFAQRPAPAGEMTMALQQQAPAASWFADYLHAGAPGMGMDMDYDLLCRALDLPVPGDEDGVVKREL
LLVADTGGGGGGFAAPLTPNTTSSMSSSSSEAAGAAAGGGGGGSFGAAEEESQSLGRCKKEDDGDGEESKDKEAMKGEED
DADTGKKGSAAGKGKGKGEKRQRQPRIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCPVKKRVERSHQ
DPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGAFPPPPPPPQTMCLPFVGRTGDGGGVIDMLGLCLPPR
NHAAVPPAATGLAPSPCCMSGPVGTVAGATTTTAPTTTTVTTTTTSSPPPPPSLQTMQHFMAQDDFGLLQDMLPSSSSSL
SFVVHSNGSNVQLP

Nucleotide Sequence
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TTCGCGCGCGCACACCACGTACACA...

Zm00001d011527_T001 from maize genome v4

Amino Acid Sequence
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MSSGDFHYHDELAALFAQRPAPAGEMTMALQQQAPAASWFADYLHAGAPGMGMDMDYDLLCRALDLPVPGDEDGVVKREL
LLVADTGGGGGGFAAPLTPNTTSSMSSSSSEAAGAAAGGGGGGSFGAAEEESQSLGRCKKEDDGDGEESKDKEAMKGEED
DADTGKKGSAAGKGKGKGEKRQRQPRIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCPVKKRVERSHQ
DPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGAFPPPPPPPQTMCLPFVGRTGDGGGVIDMLGLCLPPR
NHAAVPPAATGLAPSPCCMSGPVGTVAGATTTTAPTTTTVTTTTTSSPPPPPSLQTMQHFMAQDDFGLLQDMLPSSSSSL
SFVVHSNGSNVQLP

Nucleotide Sequence
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ATTTCGCGCGCGCACACCACGTACA...

Zm00001eb359740_T002 from maize genome v5

Amino Acid Sequence
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MSSGDFHYHDELAALFAQRPAPAGEMTMALQQQAPAASWFADYLHAGAPGMGMDMDYDLLCRALDLPVPGDEDGVVKREL
LLVADTGGGGGGFAAPLTPNTTSSMSSSSSEAAGAAAGGGGGGSFGAAEEESQSLGRCKKEDDGDGEESKDKEAMKGEED
DADTGKKGSAAGKGKGKGEKRQRQPRIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCPVKKRVERSHQ
DPAVVITTYEGKHTHPIPSTLRGSSTHLLAAQLHHHHHHNIVGGVIDMLGLCLPPRNHAAVPPAATGLAPSPCCMSGPVG
TVAGATTTTAPTTTTVTTTTTSSPPPPPSLQTMQHFMAQDDFGLLQDMLPSSSSSLSFVVHSNGSNVQLP

Nucleotide Sequence
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CCTCGCCCCCGATAAGTGAGCAAGC...


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